The phrase "all repeats in a" is not complete and lacks clarity in written English.
It could be used in contexts discussing repetitions or iterations within a specific framework or category, but it needs additional information to convey a clear meaning.
Example: "In the analysis, we found that all repeats in a sequence were consistent with the expected outcomes."
Alternatives: "all iterations in a" or "every repetition in a".
It is generally assumed than concerted evolution homogenizes individual rDNA repeats and produces a mostly uniform sequence in all repeats in a given species.
Let the raw substitution rate at repeat i be μ i, and let indicate the average raw substitution rate of all repeats in a bin of size s around locus i.
With these assumptions, we could estimate the frame-shift mutation rate of individual mononucleotide repeats, and we could sum up the estimated frame-shift mutation rates over all repeats in a genome to get an estimate of the genome-wide frame-shift mutation rate.
The problem entailing tandem repeats focus in locating all tandem repeats in a nucleotide sequence.
For each element we obtained all ancestral repeats in a 750 kb window surrounding.
In this article, we present the first optimal algorithm for computing all tandem repeats in a weighted sequence.
Another major application that benefits from constant-time LCE queries is finding all tandem repeats in a nucleotide sequence.
Recently, the authors of [ 16] proposed an O n 2 -time algorithm for computing all tandem repeats in a weighted sequence of length n.
We improve on the time complexity of the best-known algorithm for computing all tandem repeats in a weighted sequence of length n from time O n 2 to an optimal O (n log n ).
For example, a single non-synonymous mutation, which would otherwise have minimal effect on the overall structure or function of the protein, could rapidly propagate across all repeats, resulting in a large-scale change in the properties of MRP that could lead to a decrease or loss of mate recognition between formerly compatible isolates.
The algorithm that finds all 'K-edit repeats' in a sequence, given an integer K, is based upon the following interesting fact.
