Sentence examples for all chips were normalized from inspiring English sources

All chips were normalized with the robust multichip analysis procedure [45].

Intensity values of all chips were normalized with dChip software (http://www.dchip.org) [37] and applying the model-based expression analysis algorithm (PM-only or PM/MM model) the expression values were calculated.

All chips were normalized against the mean of the total sums of Avg Diff values across all 29 chips.

All chips were normalized using the robust multiarray average or the GeneChip robust multiarray average procedure in R packages from Bioconductor (Fred Hutchinson Center, Seattle, WA) (http://www.bioconductor.org, last accessed December 2008).

All ChIPs were normalized to input.

All array chips were normalized together, mitigating the effect of possible differences in cell viability.

For per chip normalization, all expression data on a chip were normalized to the 50th percentile of all values on that chip.

For "per chip" normalization, all expression data on a chip were normalized to the 50th percentile of the measurements taken from all values on that chip.

Chips were normalized with the quantile normalization procedure.

Chips were normalized with Robust Microarray Analysis (RMA) in R using Bioconductor.

Affymetrix HGU133+v2.0 chips were normalized with the Robust Multi-array Analysis (RMA) program [60] and annotated with the HGU133+v2 Bioconductor annotation packages.