Sentence examples for alignments were loaded from inspiring English sources

Alignments were loaded into a MySQL database.

67 The codon alignments were loaded into MEGA (v. 5.05).

P. patens EST alignments were loaded into a Bio::DB::Seqfeature database.

RNA-Seq read alignments were loaded into the viewer alongside the gene models and read support for alternative transcripts was compared between samples.

The super alignments were loaded into TOPALi (Milne et al. 2009) for model selection and maximum-likelihood tree generation using RaxML (WAG/GTR GAMMA) with 100 bootstraps.

The remaining (protein) alignments are loaded as edited nucleotide sequences from the internal database and analyzed for RNA editing before the results are displayed in individual tabs.

Additionally, the same alignment was loaded into the rate shift analysis server at [ 29] along with the same Newick file.

To compare the UD-trees with the "best tree", the alignment was loaded into PAUP and site-wise log-likelihood values for each tree were calculated.

The resulting alignment was loaded into AlignMiner and divergent regions were identified with the Weighted score in obtain a small list of the most divergent regions.

The genome alignment was loaded in to the MEGA4 [ 50] for editing and subsequently the Neighbor-joining method was used to predict the tree with 1000 replicates for the bootstrap value calculation.

The reduced alignments plus the cladograms were loaded into PAUP* for performing the KH tests.