Sentence examples for alignments were assigned to from inspiring English sources

Alignments were assigned to genomic coordinates as follows.

FP alignments were assigned to specific P site nucleotides by using the position and total length of each alignment, calibrated from FPs at the beginning and the end of CDSes.

Segments of the alignment were assigned to structural motifs based on the KcsA structure.

In step 2, we define a partitioning scheme in which all sites in the alignment are assigned to a single subset, and we then select a best-fit model of molecular evolution for this subset.

The only exceptions to this was in cases where two stickleback linkage groups showed identical numbers of RAD loci alignments, then both were assigned to that Atlantic salmon linkage group.

By comparing the e-value ratio (virus/fungi or virus/plant) of all proxy-reference genome alignments, 10 contigs were assigned to pea and 9 contigs were assigned to S. sclerotiorum based on an e-value ratio >1e, 30 contigs were difficult to distinguish, with e-value ratios between 1e-20 and 1e.

From these two alignments the SNP markers were assigned to a position in sorghum if they had the largest number of identical residues and shared at least 80% of the residues in the probe.

Vaginal 16S rDNA Reference Database sequences that aligned at ≥ 97% identity in the V1-V3 region using the USEARCH v4.0 global alignment algorithm [ 23] were assigned to the same species-level taxon.

Zero coverage values were assigned to gaps in the alignments.

For each sample, reads were assigned to a genotype based upon the highest quality alignment.

To compare the distributions of rates (see below) both the real and simulated alignments were assigned an evolutionary rate category according to 0.025 substitutions/position intervals.