Sentence examples for alignments sequence from inspiring English sources

For even skipped alignments, sequence from Themira putris (Hare et al. 2008) was also analyzed.

From the alignments, sequence Hidden Markov Models (HMMs) were constructed using the HMMER 2.2 package [ 30].

The Blast output is parsed to collect various features (scores, pairwise alignments, sequence annotations, sequence identification numbers, e-values).

It defines exchange formats for the most common data types: biological sequences, sequence alignments, sequence annotation and references to data, resources and vocabularies.

To avoid any bias from unsuccessful alignments, sequence pairs for which neither method yielded an alignment with at least one correct symbol alignment were excluded.

It incorporates methods from the full plethora of evidence sources, for instance from EST libraries, protein alignments, sequence comparison, or from increasingly popular RNA-Seq runs.

The resulting protein alignment was reviewed and finalized using the multiple alignment sequence editor MASE.

BTT performed the sequence alignment, sequence analysis, and tree-drawing.

These alignment sequences to obtain the full-length sequences were extended from RNA-seq contig sequences.

Alignments between sequencing results and the reference genome were performed using BLAST or BLAT83.

We used the previously obtained MAFFT amino acid sequence alignments converted to coding sequence alignments.