Sentence examples for alignments of the first from inspiring English sources

For example, the average rank over all alignments of the first positive found is 3.8 for GroupSim and 9.7 for SH.

The permutation reshuffling test calculates the optimal Smith-Waterman alignments of the first query sequence with N reshuffled versions of the second query sequence.

These alignments were performed using the whole genome alignment software Eland (Illumina), which reports unique alignments of the first 32 bases of each read, allowing up to 2 mismatches.

Alignments of the sixth type 3 repeat or the C-terminal region (i.e. the type 3 repeats and L-lectin domain) were prepared by the progressive, neighborhood-joining alignment method, CLUSTALW [ 81].

We ran an iterative HMM search (jackhmmer) on the NR database with a MUSCLE alignment of the first 50 amino acids of a core set of well-aligned 31 sequences to look for the prevalence of this motif.

This approach consists in introducing a wavefront curvature Φlens x,y) on the beam incident on the SLM by modifying the alignment of the first beam expander.

Multiple sequence alignment of the first NADH dehydrogenase subunit (nuoH) suggest shared evolutionary history of this respiratory chain component between A. dehalogenans, M. xanthus and S. aurantiaca (Figure S5).

(A ) Alignment of the first 36 residues of histone H3 from the indicated organisms.

Similarly, Oliver et al. [ 23, 24] distributed the pair-wise alignment of the first step in the progressive alignment, where all pair-wise alignments are computed, on FPGA.

The map files generated by alignment of the first and second sets of 40 base reads were merged using MAQ mapmerge and a consensus sequence generated.

An iterative HMM search (jackhmmer) on the NR database with a MUSCLE alignment of the first 60 amino acids converged after three iterations.