Sentence examples for alignments of potential from inspiring English sources

Read alignments of potential V2R contigs were manually corrected for long homopolymer errors introduced by Roche/454 pyrosequencing.

characTErizer.pl requires two files to classify the insertion sites, the first listing the locations of all nonreference insertions (determined by flankers) and the second containing alignments of potential spanners to the genome.

Out of the two sets, 5,000 alignments of clearly orthologous exons and 20,000 alignments of potential-non exons were used as training data and the rest were used as test data in [ 15].

A set of simulated alignments, i.e. 26 alignments with length around 100,000 bps are also generated according to the frequency and the conservation of the nucleotides in the alignment of potential non-exons.

We chose the 18-bp sequence based on alignment of potential BNIP3 binding sites identified in the DR5 promoters, and these oligonucleotide probe was incubated with recombinant BNIP3 proteins.

Alignments of the potential TR/VR pairs are output to a file.

In most Hox genes, the 3′ downstream regions were well aligned among Drosophila species, and therefore we predicted 3′ UTRs based on the sequence similarity (for the example alignments of the potential 3′ UTRs, see supplementary fig. S2, Supplementary Material online).

Putative miRNA targets were identified based on the total numbers of mismatched nucleotides between miRNAs and the alignment structures of potential targets.

Alignment of the potential paralogues and their orthologues was performed using the GUIDANCE web tool [ 66].

Primers are identified by scoring the alignment of each potential primer to the read and choosing the best match.

A multiple sequence alignment of 606 potential AMPs was used to calculate a matrix with the genetic distances for each pair of the sequences.