The phrase "alignments of input" is correct and usable in written English.
It can be used in contexts related to data processing, programming, or any situation where inputs need to be organized or matched in a specific way.
Example: "The software requires the alignments of input to be precise for accurate data analysis."
Alternatives: "arrangements of input" or "configurations of input".
For all these different categories, the fusion comprises of two primary steps: (i) image registration, which is nothing but spatial alignment of input images, and (ii) combining those aligned images.
To visualize the ClustalW (version 1.83, [3]) clustering tree (the guide tree that is based on distances calculated from pairwise alignments of all input sequences), a Java based library called ATV [15] was used.
The output shows the motifs as local multiple alignments of the input sequences.
In general, progressive multiple sequence alignment algorithm follows three steps: (i) Perform all pair-wise alignments of the input sequences.
The TRACKER program computes pairwise local alignments of all input sequences using BLASTZ [ 42] with non-stringent settings.
This way, the method can produce global as well as local alignments of the input sequences, whatever seems more appropriate.
The basic step in WAMI is the computation of all pairwise alignments of the input maps, uploaded or edited online in multi-fasta format.
For this paper, our main aim is to be able to rapidly generate guide trees which can be used to make multiple alignments of the input sequences.
To accomplish this, the EvoPrinterHD repeat finder algorithm superimposes the first, second and third highest scoring eBLAT alignments of the input DNA to its own genome and then color-codes the readout to identify single or multiple repeat sequences within the input reference DNA.
We used these Logos as inputs to a new algorithm, LogoAlign, that finds an alignment of the input Logos that maximizes cumulative information over short, motif-sized windows.
