The phrase "alignments indicates that the" is not correct in written English due to subject-verb agreement issues.
You can use it when discussing the implications or conclusions drawn from alignments, but it needs to be corrected to "alignments indicate that the."
Example: "The alignments indicate that the project is on track for completion by the deadline."
Alternatives: "alignments suggest that the" or "alignments show that the".
The network topology in Fig. 6A and 6B indicates that the ECH domain in the archaeal bifunctional proteins is more similar to the sECH ECH domain than either of these two domains is to the ECH in the other bifunctional protein cluster; a look at the underlying alignments indicates that the domain ordering between archaeal and non-archaeal bECH sequences has been reversed (Fig. 5D, Fig. 6C).
Analysis of pairwise sequence alignments indicates that the XIP sequences within the subgroup are highly similar.
Dependence of the 30 33 nt peak on multiple reportable alignments indicates that the reads are encoded by repetitive DNA.
However, a closer inspection of the sequence alignments indicates that the species in our datasets is not exactly this, but a related species.
Initial visual inspection of sequence alignments indicated that the Ribo-Zero libraries showed more 'background' alignments (reads aligned in intergenic and intronic regions) than the poly(A) datasets.
Structure-based sequence alignments indicate that the structural fold, and the PAPS-binding site, is conserved between the two classes.
Sequence alignments indicate that the active site architecture of Ech30 resembles that of endochitinases such as hevamine from the rubber tree (Hevea brasiliensis).
Sequence alignments indicate that the CTRP 1st to 4th vWA domains exhibit greater conservation, and thereby are perhaps functionally more important than the 5th and 6th domains.
The amino acid sequence alignments indicated that the two medaka Myc genes are orthologs of human MYC (Fig. 1).
ClustalX alignments indicated that the Cyphoma CYP4 protein sequences share amino acid identities ranging from 26.3 to 99.2%.
Full-length sequence alignments indicate that the subgroups depicted in Figure 2 are highly specific for the amino acids that populate the active site.
