Exact(11)
Further, given the same number of species, MOSAIC alignments include more columns aligned with high confidence.
The resulting reference alignments include 1215 HEAT repeats and 575 ARM repeats, respectively (provided in Supporting Information S2).
Indeed, whereas official sequence alignments include up-to-date allelic characterization, the molecular resolution of alleles in population data may vary (e.g. a population sample may contains typings referring to A*0101 while this allele name is not anymore listed in the sequence alignments following its splits into several 6 and 8 digits alleles, see hereafter).
Guide alignments include 57 786 domain pairs over 212 CDD families.
The underlying idea is that significant alignments include regions having exact matches between two sequences.
Overextended alignments include additional sequence from outside the homologous domain boundaries.
Similar(49)
Third, we produce final alignments including the seeds.
Bowtie alignments included references for mitochondrial DNA, adapter sequence, and ribosomal RNA.
From multiple protein alignments including sequences identified in the four aerobic bacteria (A.
IndexDP alignments included references for poly-A, poly-T, poly-C, and poly-G oligomers.
The alignments included sequences from K. veneficum and representatives from all chromist lineages.
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