Sentence examples for alignments have the same from inspiring English sources

Both alignments have the same nucleotide composition and the same frequency of nucleotides per column.

The presented method assumes that both alignments have the same evolutionary history during the cofolding step.

When two alignments had the same coverage, we selected the alignment with the higher score.

Not all sites in an alignment have the same rate of evolution.

DOPS is 0 if all positions in an alignment have the same conservation score and 100 when no two positions have the same conservation score.

However, sequences generated by shuffling each position of the native alignment have the same conservation properties as the native alignment, and the "SHUFFLE" method detects a total of 74 new homologs.

Compared to other models, M0 shows a worse fit for the data because of its much lower log-likelihood value than all other models (Table 2), and thereby ruling out the possibility that all sites in the alignment have the same ω ratio.

The NJ trees for the 12 Mbp alignment had the same topology as the NJ trees for the 3 Mbp alignment.

Because every column (position) in an alignment has the same underlying relationship among the rows (sequences), every estimated pairwise coevolution score will have this influence in common.

In these tests we excluded taxa for which one or more loci were not available, so that each alignment had the same set of taxa.

To ensure that each replicated alignment had the same exact rate distribution but not the same amino acid or DNA sequence, replicates were created such that each replicate contained 60 invariant sites and 24 sites for each of the 10 rate categories if rate heterogeneity was specified.