Sentence examples for alignments carried out from inspiring English sources

All mammalian sequences were extracted and multiple sequence alignments carried out using CLUSTALW 2.0 [ 18].

RW participated in coordination of the study, participated in sequence alignments, carried out the RACE and splice variant specific experiments, and helped drafting the manuscript.

Alignments carried out in this manner provided an independent prediction of potential gene locations and not all PGLs corresponded to the MUMDB ORFs.

EES, eukaryotic environmental DNA survey; LBA, long-branch attraction; SSU rRNA, small-subunit ribosomal RNA CB constructed and screened the sequence alignments, carried out all phylogenetic analyses, drafted the manuscript and prepared all figures and tables.

When several copies of a family were available for one species, the boundaries of the ITRs were manually analyzed and detection of the flanking regions in multiple nucleotide sequence alignments carried out using MUSCLE [ 36].

Large-scale sequence conservation was analysed using the Artemis Comparison Tool (ACT [ 52]) to project BLASTN alignments carried out on the Health Protection Agent Double Act server http://www.hpa-bioinfotools.org.uk/pise/double_act.html, after masking repeated sequences with RepeatMasker [ 53].

The alignment carried out in this work is based on the normal distributions transform [15] of the range images and a scale invariant feature transform [16] feature detector applied to the high-resolution color images.

Finally, a total of 48 PCR primers pairs were used, and after sequencing, low quality sequences were removed and genome alignment carried out.

This program performs a pairwise alignment of the sequences prior to the construction of a dendrogram, which describes the approximate groupings of the sequences by similarity, with the final alignment carried out using this dendrogram as a guide.

> -wrap-foot> The first systematic validation of a multiple sequence alignment using reference alignments was carried out by McClure (1994).

Multiple alignments were carried out using default parameters in Bioedit (Biological sequence alignment editor V5.0.9, http://www.mbio.ncsu.edu/Bioedit/bioedit.html).html