The phrase "alignments based on the" is correct and usable in written English.
It can be used when discussing how different elements or factors are coordinated or arranged according to a specific criterion or standard.
Example: "The alignments based on the new guidelines have improved team collaboration significantly."
Alternatives: "arrangements derived from the" or "configurations according to the".
A similar observation was made by ContextMap (Bonfert et al., 2012) that multiple alignments from a RNA-seq aligner could be handled by removing the incorrect alignments based on the 'context' of the alignments.
In addition to the trimming and initial parameter setting of aligners, we also investigate the impact of filtering the alignments based on the mapping quality score provided in the output files of different aligners.
Finally, we filtered the alignments that showed alignment rates less than 50% of the full-length copies and filtered redundant alignments based on the GeneWise score.
The Angels are shifting their infielders more this year than even before, tailoring their alignments based on the pitcher, the batter, the count, any runners on base, the outs in the inning, and the score of the game.
We filtered the mammalian alignments based on the exon structures of the coding sequences.
Residues included in the core differ between the alignments based on the two algorithms.
The retrieved sequences were aligned using MAFFT v.7 (Multiple sequence alignment based on fast Fourier transform, using the default parameters).
Then, we estimated the probabilities of being protein orthologs for potential pairs of proteins by Gibbs sampling, and obtained a one-to-one alignment based on the most probable associations.
The input aligned sequence files were updated within DnaSP to identify coding regions in the alignment based on the annotated D. pseudoobscura genome (version R2.27).
To fulfill the requirements, strategy alignment based on the Business Enterprise Architecture is suggested in this paper.
We develop a method to guide the alignment based on the observed image properties and the sensor characteristics.
