The phrase "alignments and alignments" is not correct and sounds redundant in written English.
It may be used in a context where you are emphasizing different types of alignments, but it would be clearer to specify what those alignments are.
Example: "In our project, we need to consider the various alignments and alignments of our goals with the team's objectives."
Alternatives: "alignments and adjustments" or "alignments and configurations".
First, based on the availability of sequenced genomes and large databases of sequenced transcripts (ESTs and cDNAs), alternative splicing events may be searched through reciprocal transcript alignments and alignments to genomic sequences.
All data including raw sequences, cluster memberships, cluster alignments, and alignments with homologous sequences are provided for the user to examine the source of annotations.
In complement, the parameter τ (i.e., τ, 2.5 and 97.5 quantiles), representing time in mutational units since expansion, was evaluated using Arlequin 3.5 (Excoffier et al. 2005) on species-specific alignments and alignments including the two species.
We demonstrate that this measure of neutrality successfully distinguishes alignments of known bacterial structured regulatory RNAs from several different types of decoy data including both shuffled alignments and alignments constructed from intergenic or protein-coding sequence.
It is important to remember that the described process not only results in term translations but that it also entails the process of identifying possible term candidates as well as weeding out mistaken alignments and alignments which cannot be deemed as terms of the domain in question.
qAlign also supports spliced alignments and alignment of bisulfite-converted reads (both directional und undirectional bisulfite libraries).
Manual correction of some alignments and alignment of fragments was necessary in cases of partial sequences and copies with internal insertions.
In this short report, we investigate alignments and alignment-based phylogenies constructed for a set of 22 ABC transporters using CLUSTAL W and DIALIGN.
We define Impact as the normalized difference between Alignment and Alignment∗.
Administrative criteria included strategic alignment and alignment with regional/national priorities, policies and objectives.
