The phrase "alignments against" is correct and usable in written English.
It can be used in contexts where you are discussing positions, strategies, or agreements that are in opposition to something else.
Example: "The alignments against the proposed policy were evident during the debate."
Alternatives: "positions opposing" or "strategies against".
Inverted D segments were omitted from the simulations because IMGT/VQuest and iHMMune-align do not allow for alignments against them.
A bigger worry would come if the CIS proved an incubator for alignments against it.
CEGMA reported 245 complete alignments against the core set of 248 eukaryote orthologs (98.8% complete, up to 99.6% when partial alignments are included).
Along those lines, he decided to play the percentages more than ever this year and intensify the Rays' defensive shifting, with more frequent alignments against right-handed hitters.
CBSSports.com reported Wednesday that the Baltimore Ravens' defense took a break by "practicing its alignments against a very formidable opponent: jumbo gray plastic trash cans".
This strategy uses multiple HHpred alignments against proteins of known 3D structure to enable protein repeats referenced from the 3D structure to be traced back to the query protein sequence by using user-directed repeat assignments.
We first predicted single-nucleotide polymorphisms (SNPs) and 1- to 20-bp insertions and deletions (hereafter called small indels) in unique regions on the basis of single-read alignments against the 119.2-Mb 119.2-Mbe genome, excluding 6.8 Mb of highly referencee regenome1,12,14.
Assembled sequences from pooled reads were validated by sequence based alignments against ESTs submitted at NCBI database.
We score calculated alignments against the correct alignments generated during the evolution process.
To confirm annotations and identify unannotated clones, we used EST alignments against the chicken genome via blat (http://genome.ucsc.edu/), and megablast searches of GenBank databases.
There were 42 SNPs that mapped to a different chromosome in build 8 as compared to build 7. Inspection of the alignments for these sequences reported against the build 8 version of the genome showed that the hits identified against build 7 were still present but had been superseded by better alignments against genomic sequences introduced in build 8.
