Sentence examples for alignment with many from inspiring English sources

Like IsoRank, these methods have a free parameter to balance the trade-off between matching similar proteins, on the one hand, and producing an alignment with many conserved interactions, on the other hand.

We wish to investigate two different questions: (i) compare the ability of the different methods to find alignment with many conserved interactions, and (ii) assess whether conserving more interactions really helps in retrieving more functional orthologs.

Different alignments could give very different results, especially for alignments with many gaps.

However, some of the clusters with the strongest evidence of positive selection had alignments with many indels, which makes alignment challenging.

Apreference for large indels in alignments is biologically more meaningful than alignments with many small indels and generally addressed by using affine gap costs.

This approach appears particularly beneficial when large Markov rate matrices are used, for example in the calculation of codon substitution models, or when treating alignments with many sites (as opposed to many taxa).

If my analysis is correct, then both Dawkins and Wilson should bring their views into alignment with the many or at least stop invoking the argument from authority to support their own views.

This may be because that MODELLER cannot build a reasonable model from an alignment with too many errors.

Alignments with too many sequence dissimilarities on high-quality bases are discarded.

When signing the bill into law last month, Gov. Pat McCrory portrayed the steps as popular measures that would bring the state into alignment with rules in many other jurisdictions.

It was a controversial alignment at the time, with many speaking out against befriending a former "enemy".