In our alignment, we showed that this conservation extended to the merlin and ERM proteins of various species for which sequences were available to date.
Using perfect match alignment, we showed that approximatly 30% of expected PstI-MseI and PstI-MspI tags were present in the genomic libraries of at least one parental line and 45% of tags were present in both parental lines.
Moreover, using multiple sequence alignment and pairwise sequence alignment strategies, we showed that RbTrxR-3 has high overall sequence similarity to other teleostean TrxR-3 proteins, including highly conserved active site residues.
Based on previous nucleotide sequence alignments and phylogenetic studies, we show that the use of molecular methods enabled the discrimination of these three beet Polerovirus species, but with differences in efficiency and specificity.
In figure 3 we show alignments for both motifs, however it is important to note that we have newly discovered the ALP-like motif and denoted it AM in analogy to the earlier denoted ZASP-like motif (ZM), but no structural or functional similarity is apparent between both motifs.
In Figure 12, we show the alignment of the back-translated human and rat platelet-derived growth factor proteins.
In Figure 6, we show the alignment of the sequences of the catalytic subunit of PKA in a large variety of organisms spreading from yeast to human.
In Figure 9, we show the alignment of two presynaptic neurotoxins from two higher snakes of the Elapidae family (Bungarus candidus and Naja kaouthia).
In Figure 1, we show an alignment of the sequences of human MR and GR with orthologs in skate, a cartilaginous fish, and lamprey and hagfish, two jawless fishes.
