The phrase "alignment we further" is not correct and does not convey a clear meaning in written English.
It may be intended to express a continuation or enhancement of alignment in a specific context, but as it stands, it lacks clarity and coherence.
Example: "In our discussions, we will focus on the alignment we further in our strategic goals."
Alternatives: "alignment we enhance" or "alignment we develop".
Based on the position of the alignment, we further filtered for reads that partially aligned within 5 bp of an exon boundary using RefSeq annotation.
To investigate the influence of preoperative alignment, we further subclassified the knees into three groups: valgus (less than −3° mechanical axis), neutral (−3° to 3°), and varus (greater than 3°).
For multiple network alignment, we further compared different network alignment algorithms based on their capability of predicting equivalence classes that span all networks, since one of the main goals of multiple network alignment is to find functionally homologous proteins that are conserved in the networks of all target species.
In addition, together with the multi-genome alignments, we further examined the force of Z chromosome evolution in birds [ 9].
For both transcriptome and exome alignments, we further removed duplicates with Picard's MarkDuplicates utility (http://broadinstitute.github.io/picard) (v1.59) and performed local realignment using the GATK's IndelRealigner program [ 22] (v1.4-15 v1.4-15
In order to characterize the difference between subfamilies based on the overall alignment, we made further subdivisions to the domains mentioned above.
To exclude co-optimality of MSA as a potential source of alignment error, we further performed the Heads or Tails (HoT) analysis [ 58] on the identified orthologs.
If there were any large discrepancies (i.e., <80% alignment using ΔSUV), we further investigated the reason for this low alignment percentage.
To bring models into further alignment, we use a Uniform (−100, 100) distribution over virus locations and serum locations.
To prevent arbitrary alignment in hypervariable regions, we further demand that consecutive "parts" must be joined by at least one mutually aligned, identical base.
To confirm that it is caused by gene duplication, we further performed alignment and dot-blot analysis of those two tarIJL regions in each of the S. aureus strains.
