Sentence examples for alignment was calculated from inspiring English sources
Structural alignment was calculated using TM-align program [ 29] as implemented in T-Coffee package [ 30].
The % alignment was calculated as the percentage of reads that aligned to the hg18 human reference genome.
For quantitative characterization of the anisotropy and its decrease, the degree of alignment was calculated from the azimuthal scattering curves.
Sequence alignment was calculated by smith-waterman alignment [43], while structure alignment was calculated by using jFATCAT [44].
The degree of divergence of an alignment was calculated as 100 minus the degree of identity in percent rounded to the closest integer.
The total similarity of the multiple alignment was calculated from the miRNA subset having similar 2000 nt sequences using the build in analysis "Similarity" of the Vector NTI v10 AlignX program (Invitrogen).
Main fibre diameter and orientation, as well as the degree of fibre alignment, were calculated, while a subset of the spun scaffolds were tested for their tensile properties.
For reasons of comparability with MIF descriptors, sequence descriptors based on the alignment were calculated.
An alignment is calculated by measuring the azimuth, the angle from north, of the structure and the altitude of the horizon it faces The azimuth is usually measured using a theodolite or a compass.
A score for each column in the alignment is calculated using the concept of continuous sequence space introduced by Vingron and Sibbald [64] and the column scores are then summed over the full length of the alignment.
