The phrase "alignment to show" is correct and usable in written English.
It can be used when discussing the arrangement or positioning of elements in a way that is intended to demonstrate or illustrate something.
Example: "The alignment to show the data trends was crucial for the presentation."
Alternatives: "arrangement to demonstrate" or "positioning to illustrate".
By performing three independent alignments using the staggered genomic indices and then superimposing the resulting alignments to show all aligning sequences, the enhanced-BLAT (eBLAT) detects as much as 75% more conserved sequences when evolutionary distant sequences are aligned [22].
By performing three independent alignments using the staggered indices with the optimized alignment parameters and then superimposing the resulting alignments to show all aligning sequences, the overall detection of conserved sequences has been improved by as much as 75% when evolutionary distant orthologous sequences are aligned.
The parameters for BlastN program were as follows: Expected (E) threshold = 10, comparison matrix = Blosum62, alignments to show = 100, allow gaps = yes, filter = yes.
A random sequence of equal length and composition was included in all alignments to show pairwise percent identities that are not significantly different from random identity.
The default statistical parameters used in the BLASTP analysis were as follows: BLASTP-protein query of the protein database; expected threshold (E): −1, comparison matrix: BLOSUM62; no. of alignments to show: 100.
Further settings were chosen as follows: cost to open a gap = 25, cost to extend a gap = 10, reward for a nucleotide match = 2, penalty for a nucleotide mismatch = -3, word size = 56, megablast search = T, number of alignments to show = 1.
Over time, you develop a range of positions that can be used to calculate an alignment score to show how congruent your views are with other people, political candidates and advocacy groups.
A result image of adjusted alignment is demonstrated to show the reduced discrepancy by using the alignment measurement method.
Whole-genome alignment was needed to show genomic context, but in practice Mugsy aligned some locus boundaries incorrectly, so its results were manually adjusted as described in the Methods.
