The phrase "alignment to several" is not correct and may be unclear in written English.
It could be used in contexts discussing conformity or agreement with multiple entities or standards, but it lacks clarity without additional context.
Example: "The alignment to several industry standards is crucial for compliance."
Alternatives: "conformity with multiple" or "agreement with several".
In most cases we were able to either confirm or establish an identification based on the EST alignment to several annotated transcriptional units (TU; i.e. RefSeqs or mRNAs) that also mapped onto the chicken genome.
The two main goals of our study were (a) to develop rules for decreasing sequence ambiguity (sequence alignment to several locations in the genome), which would decrease noise and increase efficiency in sequence alignment and SNP identification, and (b) to evaluate the effects of different SQ filtering strategies for cost-effective, large-scale identification of SNPs.
Alignments to several cDNA and EST sequences are annotated in Ensembl in this region (22,400-100,300 bp) on unplaced scaffold GL894597.1 but no Ensembl gene model has been built or core gene defined.
Sequence alignments corresponding to several of these putative RNA structures were further examined to determine phylogenetic distributions and identify transcription start sites from available RNA-seq data.
To avoid ambiguous alignments such as cDNA mapping to several gDNAs, a spliced alignment was computed using GenomeThreader (Gremme et al., 2005), and the best alignment was retained as the correct gDNA/cDNA pair.
LA has contributed to the interpretation and presentation of the results, has written the section Word alignment and contributed writing to several other sections.
In this manner, a LTI can be paired with more than one group of non-overlapping alignments which could lead to several parent genes and hence several pseudogenes [ 16].
Additionally, we applied the Shimodaira-Hasegawa toseveralexampleexalignmentsnmento to determine whether or not the improvement in goodness-of-fit was influenced by sampling variability.
This report presents a comprehensive search and scan of NGS genomic alignments to identify and annotate several families of non-protein encoding RNA genes.
In addition to the diagonal alignment, several short alignments are present (Additional file 8).
Similarly to the classical sequence alignment problem, the goal of the SAF problem is to find an alignment of several RNA strings, and in addition to find a common folding for the aligned segments of the strings.
