The phrase "alignment to separate" is not correct and lacks clarity in written English.
It may be used in contexts discussing the need to align or adjust something in order to create separation, but it requires additional context for proper understanding.
Example: "We need to ensure proper alignment to separate the two components effectively."
Alternatives: "adjustment for separation" or "alignment for division".
Additional validation was performed by inspection of multiple alignments to separate gene family clusters (eg: cathelicidins), identify splicing variants (eg. alpha-casein) and check for artefacts such as chimeras, incorrect vector clipping error, simple sequences or sequence rearrangements.
Although the splice sites in the transcript-to-genome alignment can help to separate these transcripts, it remains a problem where one or more of the transcripts align without introns.
At these two locations, the physical map fingerprints [ 20] of both haplotypes occurred within the same contig, and BES alignments were needed to separate allelic BAC clones for sequencing.
In particular, (Bandeira et al., 2007b) recently showed how spectral alignment can be used to separate between b/ y-ions and thus generate strings as in this model.
Additional focused classification of Kir6.2 CTD with a soft mask but without alignment was used to separate 3D classes with different CTD conformations.
Alignment files were split to separate reads mapped to the forward and reverse strands and Cufflinks was run, using default parameters, on each file separately.
The reads from these SAM files were then separated based on their alignment to the forward or reverse strand.
The UATs were added to separate alignments of nucleotides encoding N and C-termini generated by Garb et al. [ 44] and Ayoub et al. [ 33].
Secondary structure information was used to separate gene alignments according to stem and loop structures present in folded ribosomal subunits; tree topologies from these partitioned gene alignments were compared to non-partitioned ML runs.
In particular, alignment and equality are separate concepts because equal voter influence is neither a necessary nor a sufficient condition for alignment to arise.
