In addition to the general Min-Cost HSA problem, we also consider special cases of the problem in which the two input trees are rooted and/or ordered, and the alignment is required to satisfy certain restrictions with respect to these additional properties.
At 202 amino acids, Met14p is less than half the length of the other OrthoMCL family members and therefore fails to satisfy the 50% alignment constraint used in the Jaccard clustering algorithm.
COCOA was designed to satisfy the requirements of the CMS alignment system, which has several thousands of components.
The results show that band alignments at metal-gate/high-κ interfaces can be engineered to satisfy the application for CMOS devices through the interface structure-control.
For each CNTN, 50 models were generated using the model-building software Modeller (mod9v7), to satisfy the spatial restraints issued from the alignment with the target protein (Eswar et al., 2006).
To satisfy the requirements for the safety, efficiency, and quality, an alignment system is developed for this facility.
Whatever similarity measure is used for image registration, it has to satisfy one basic condition - at the exact location of the correct alignment of two images, the similarity (measure) has to be maximal.
Consequently, researchers often create an initial sequence alignment that is afterwards corrected manually or by the aid of RNA alignment editors (e. g. CONSTRUCT [ 6], JPHYDIT [ 7], RALEE [ 8], or SARSE [ 9]) to satisfy known structural constraints.
To satisfy detailed balance, the set C must be constructed so that it contains at least the current alignment A; full conditions under which this procedure satisfies detailed balance are described in the Appendix.
They were satisfied "to satisfy themselves".
