Sentence examples for alignment to obtain the from inspiring English sources

MNet also often outperforms MNet(λ = 0), which first uses kernel target alignment to obtain the composite network, and then applies classification on the composite network to predict protein functions.

We remove segmental duplications based on criteria such as the score or the length of the alignment to obtain an unambiguous map.

Given that the Smith-Waterman similarity score is related to the size of the alignment, we divided the score by the length of the alignment to obtain a normalized sequence-similarity score (NS).

We applied SiPhy to the control alignment to obtain a null distribution of LO scores for calculating P-values.

For example, in Table 4, when k is 7 and "match-core" is 2 times k, a candidate alignment is required to have at least 14 contiguous matching symbols; and then, this candidate is scored using the local alignment algorithm to obtain the final alignment.

These alignment sequences to obtain the full-length sequences were extended from RNA-seq contig sequences.

Naturally, the choice of the weighting scheme for the multiple alignment used to obtain the consensus sequence or profile as well as the associated pseudocounts will also exert a significant influence on the result.

The resulting alignment was used to obtain the corresponding nucleotide (codon-based) alignment.

However, it should be noted that face alignment was employed to obtain the result in the GPROF method, while the EGM-rgbGE result is without face alignment.

In this step, we employed the alignment of BLASTN to obtain the list of read mapped to a pre-miRNA.

Finally, these alignments were adjusted manually to obtain the best alignment for the LRR-domain.