Sentence examples for alignment to identifying from inspiring English sources

The human reference PAX2 mRNA (GenBank: NM_003987) was used as query in cross-species Spidey alignment to identifying corresponding cattle sequences.

Next, the reads at each CAL are further aligned using gapped local alignment to identify the best match.

These sequences were aligned using Clustal Multiple Alignment to identify conserved and variable regions suitable for primers and probes that could differentiate the species.

We then used MuMMer 2.3[ 31]to align the contig sets for each strain, using an all-against-all alignment to identify contigs that were similarly constructed between the assemblers.

As an example, we have analyzed the tetratricopeptide repeat (TPR) motif, using multiple sequence alignment to identify the significance of each position in the TPR.

Here we develop a new WD40 Repeat Recognition method (WDRR), which uses predicted secondary structure information to generate candidate repeat segments, and further employs a profile profile alignment to identify the correct WD40 repeats from candidate segments.

The BPPS procedure was applied on this alignment to identify sequence patterns that most distinguish ErbB3 and ErbB4 from other ErbB members (ErbB1 and ErbB4).

However, given the short length of phage display peptides, using multiple sequence alignment to identify the shared motif(s) is not ideal and an alignment-free method may be less susceptible to bias.

In step 3, a sliding window analysis is carried out on each alignment to identify the best candidates i.e. with i. appropriate evolutionary rate for being potentially useful in phylogenetic analyses among close taxa and ii.

We used paired-end alignment to identify structural variation.

We used this alignment to identify amino acid substitutions that correlated with mineralocorticoid sensitivity across GRs.