Sentence examples for alignment to generate from inspiring English sources
Initially, subtomograms from the far-from-focus dataset were averaged without alignment to generate a smooth starting reference, and then iteratively aligned against the reference using an adapted version of the TOM/AV3 package, as previously described (Faini et al., 2012).
The algorithm is summarized as follows: Step 1. Decode the input speech utterance with an LVCSR decoder, collecting phone back-tracking information using word-based phone alignment to generate a word-based phone lattice.
8,460 L1 elements with length over 6000 bp were identified and used for alignment to generate LINE nucleotide base matrix.
We then performed an optimal global alignment to generate accurate alignment statistics.
Full-length Satellite 1 sequences were identified and used for alignment to generate a Satellite 1 nucleotide base matrix.
N-SCAN [ 21] combines biological-signal modelling in the target genome sequence along with information from a multiple-genome alignment to generate de novo gene predictions.
Much like with the known families, FastBLAST uses these pairwise alignments to generate multiple sequence alignments.
To compare these three alignments, we selected 50 sequences representing the phylogenetic diversity of the intestinal microbial community, extracted the alignments of these 50 sequences from the larger alignments, and then used these alignments to generate phylogenetic trees (using a maximum likelihood method available on the CIPRES web-portal: http://8ball.sdsc.edu 8889/cipres-web .sdsc.edu 8889/cipres-web
Use pairwise structure based alignments to generate a template alignment of all PDB sequences.
Fasta sequences were aligned using the web based alignment tool TranslatorX [ 25] that utilizes amino acid alignments to generate DNA sequence alignments.
We used these alignments to generate a multiple alignment of the reading-frame region of human and chimpanzee orthologues of the NANOG gene and all pseudogenes except NANOGP11.
