Sentence examples for alignment to create a from inspiring English sources

We use a reference database (RefSSU) of full-length SSU genes of known taxonomy based on the SILVA database [13], and excise the V9 region using the SILVA alignment to create a reference database of V9 sequences (RefV9).

Here we use cross-species alignment to create a draft genome from a single ram sequenced using ABI SOLiD technology.

To investigate the importance of its two binding interfaces, we used sequence alignment to create a model of the yeast Smc1/Smc3 hinge based on the known homodimeric Thermotoga maritima hinge structure [19].

In phylogeny reconstruction, the standard bootstrap for sequence data [ 5, 25] samples columns with replacement from a multiple sequence alignment to create a new alignment matrix of identical dimensions.

Secondly, searches for the site of phosphorylation were undertaken by constructing alignments of the 10 amino acid residues surrounding the conserved histidine from all predicted HKs in each replicon, and using the alignment to create a profile.

Concatenation methods concatenate the L alignments to create a single "super locus" consisting of an alignment of the m+1 species across L loci.

The phylogenetically nearest top-hit full-length sequence was designated as the reference sequence onto which all toxin family-specific reads were aligned to create a multiple alignment using COBALT [ 99].

The fact that the main part (19,000 of 31,000) of the confirmed term pairs contains one word in both Swedish and English is reasonable because the intention of the word alignment is to create a dictionary.

The proteins from each genome were concatenated then aligned, and this alignment was used to create a Bayseian model of the phylogeny.

These proteins from each genome were concatenated then aligned, and this alignment was used to create a Bayseian model of the phylogeny.

The sequences for each strain were checked and only strains for which the tef1, chi18-5, and cal1 genes were all included in the alignments were used to create a concatenated alignment of the three genes.