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The phrase "alignment to comply" is correct and usable in written English.
It can be used in contexts where you are discussing the need for something to be adjusted or aligned in order to meet certain standards or regulations.
Example: "The team is working on the alignment to comply with the new industry regulations."
Alternatives: "adjustment for compliance" or "conformity alignment".
Exact(1)
The alignment algorithm incorporates a gap penalty that limits the number of frameshifts allowed in an alignment, to comply with the observed frequency of frameshifts in a coding sequence's evolution.
Similar(59)
The pilots decided to comply.
"I'm happy to comply.
Cuba plainly fails to comply.
Only Qwest refused to comply.
I'm ready to comply.
To see it is to comply.
(a)Duty to comply.
Nobody expects the association to comply.
Margera appeared to comply with the ruling.
Banks have until Sept. 30 to comply.
More suggestions(2)
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Since I tried Ludwig back in 2017, I have been constantly using it in both editing and translation. Ever since, I suggest it to my translators at ProSciEditing.

Justyna Jupowicz-Kozak
CEO of Professional Science Editing for Scientists @ prosciediting.com