The phrase "alignment to avoid" is correct and usable in written English.
It can be used in contexts where you want to discuss the need for alignment in order to prevent certain issues or outcomes.
Example: "We need to ensure proper alignment to avoid any potential conflicts in the project."
Alternatives: "alignment to prevent" or "alignment to evade".
Your sleep style plays a big role in the type of pillow you'll need, since the pillow should ideally fill the gap between your head and shoulders when you lie down, keeping your head in perfect alignment to avoid neck pain.
We have used profile alignment to avoid the challenges of multiple sequence alignment on large families.
Many assemblers are designed to tolerate imperfect sequence alignment to avoid missing true joins.
The 'alignment tuning' option of nest was used to refine the sequence alignment, to avoid the unlikely occurrence of insertions and deletions within secondary structure elements.
Although D. papillatum appeared to be relatively fast-evolving (fig. 1), we kept this taxon in the alignment to avoid leaving E. gracilis as a single, unpaired long branch of Euglenozoa within the Discoba clade.
The program calculates the correlation between two matrices shifting positions; the correlation is normalized based on the width of the alignment to avoid high correlation based on few flanking positions.
FastBLAST uses the known families and their alignments to avoid doing unnecessary work, and it uses fast clustering to further reduce the amount of work.
Corresponding nucleotide sequence alignments were then reexamined to improve the alignments based on these protein sequence alignments to avoid frame-shift errors in GeneDoc [ 44].
For the latter, we have carefully checked the sequence alignments to avoid false (or ambiguous) positives to be sure that the identified ISs are true elements.
Although the HMM framework can cover entire genomic regions by scanning alignments with small windows, the MCMC framework developed by Rannala and Yang uses a fraction of whole-genome alignments to avoid the effect of recombination.
The other two strategies enable analyses of repetitive regions, with the best match approach providing a reasonable estimate of coverage [ 12] and reporting all possible alignments to avoid erroneous choices about read placement.
