Sentence examples for alignment to analyze from inspiring English sources

It was necessary to align many previously known fungal orthologs of Nbs1 and then use this alignment to analyze the C. cinereus genome.

We used the resulting multi-species alignment to analyze whether any of the detected variation marks out any sequence element important for regulation by modulators or regulating factors.

Family b.1.1.1 is an exception because there are 523 non-redundant structures in the family, which would yield too many pairwise alignments to analyze.

Mega5 [ 83] was used to run multiple sequence alignments and to analyze the phylogeny of the sequences.

All DNA sequences obtained were aligned using ClustalX program [ 63] and corresponding alignment was used to analyze the relationships between families.

a) Using Chlamydomonas genome information to do the alignment and annotation to analyze the RNA-Seq data.

This, in turn, allows using established alignment-based methods to analyze even large-volume next generation sequencing (NGS) datasets.

MGAviewer can be used to analyze alignment data not only for prokaryotic species but also for viruses and small eukaryotic organisms.

Based on this information, a significant alignment threshold was established to analyze the most of the nrESS, with not compromising the statistical relevance.

Since phastCons analyzes only one single alignment, the computational time to analyze a single region, around 30 seconds on a 2 ghz macbook computer, was substantially less than the 12-16 hours needed to analyze a single region with BigFoot.

This makes it possible for multiple sequence alignments to be used to analyze and find evolutionary relationships through homology between sequences.