Sentence examples for alignment time for from inspiring English sources

Evoprinter works rapidly: the alignment time for a 40 kb sequence to 17 staphylococcal genomes is accomplished in less than 20 sec.

Instead of using a hash table, SOAP2 adopts the FM-index algorithm [ 22] to build an index, which greatly reduces the alignment time for substrings with multiple identical copies.

For all aligners studied here, alignment time could arguably be considered acceptable for the application simulated i.e. alignment of targeted sequencing reads for 64 samples.

For GNPmax and CNTmax, alignment time is almost equal, and equal time of alignment is for GNPaver and CNTmin.

These two algorithms avoid some of the redundancy and confusability through the incorporation of time alignment, for direct lattice alignment (time node clustering) in algorithm A1 and from the use of the 1-best transcription in algorithm A2.

The synthetic seismograms were realigned in time, which accounts for the deviations of the real velocity structure from the assumed 1D velocity model, so the size of the alignment time correction can be an indication for the validity of the velocity model at distant regions.

This structure might be responsible for the increased alignment times in certain domains.

However, this accumulation of transformation may also result in the accumulation of small registration errors, and may, therefore, result in considerable large errors in the overall alignment for time steps that are "far away" from the common reference in the temporal succession.

By using gyro information in the new method, precision is improved and time for alignment reduced.

Namely, maximum time for alignment is for particles with the lowest aspect ratio (GNPmin).

We have shown that FastTree 2 computes accurate topologies in a reasonable amount of time for alignments with up to hundreds of thousands of sequences.