The phrase "alignment then the" is not correct and usable in written English as it lacks clarity and completeness.
It may be intended to indicate a sequence of actions or thoughts but requires additional context to be meaningful.
Example: "We need to focus on alignment, then the next step will be implementation."
Alternatives: "alignment followed by" or "alignment and then".
If different new sequences create gaps in the same position in the existing alignment, then the inserted new sequences are aligned to each other.
If new residues can be added following an alignment then the expanded set Sn is used to re-align the structures.
If the cartilage is subjected to excessive wear, excessive trauma or injury, overuse, excessive weight or improper alignment, then the cartilage will wear away leaving the bone to rub against the bone.
If your manager/employee conversations are already creating effective alignment, then the labels you give the meetings are about as important as the decision between wearing your "I don't care" lapel button on the left, or on the right.
If a sequence differed at more than one nucleotide from the highest scoring alignment, then the sequences were discarded into a separate dataset.
If the number and distribution of such stems are significantly different from those that can occur in the randomly shuffled version of the alignment, then the alignment and thus the sequences are declared as ncRNAs.
If both sides of the junction had unique alignments, then the side with the highest priority when sorting by reference sequence ID and then by coordinate, is assigned all overlap bases.
was the average for all sites, i, in partition p; if the partition was for an alignment, then was the average over all species, m.
Particle alignment then modifies the rotational and translational position of each particle, such that all particles have a comparable orientation and key features will become visible.
The best alignment then corresponds to the set of (v, j, d) that maximize α.
The alignment then proceeds by sequentially registering the remaining subjects to the group atlas using the pair-wise functional registration algorithm described above.
