Sentence examples for alignment the set from inspiring English sources

From the multiple alignment the set of landmarks is then extended to include any additional fully conserved residues not found in the first phase, and residues with less than total conservation.

Using the maximum MIp score for each position in the protein alignment, the set of protein positions, or potential features, was then sorted according to max MIp) resulting in a sorted set of features.

However from a structural point of view even with inconsistent alignments the set of residue equivalences is usually sufficient to produce a good score.

After we generated alignments, the set was curated to remove sequences with sequence identity <26% and length <70% when compared with query.

The algorithm assembles the alignment from the set of AFPs and allows non-sequential alignments and hinges.

We aim to find a set of distinct alignments which maximizes the sum of scores of each alignment in the set.

A basic and indispensable step in phylogenetic study is alignment of the set of homologous sequences [ 4].

We therefore performed a site-by-site analysis of dN/dS ratios based on the alignment of the set of 136 full-length intact coding sequences used above.

If the outer stem is a conserved match, a local alignment on the set of inner structure elements is used to find the base pair similarity score.

Let P be a single alignment containing the set of segments { P1, P2,..., P t }. l is the length of the consensus pattern.

This could be done without requiring full multiple alignment of the set of structures, which is impractical if the number of structures is large.