Sentence examples for alignment the quality from inspiring English sources

Before alignment, the quality of the reads was checked and the adapters were detected using FastQC.

It has been shown that the removal of poorly aligned regions from an alignment increases the quality of subsequent analyses.

To evaluate the effect of paired versus single end reads on alignment, the mapping quality of reads was assessed.

To improve the alignment quality, the outgroups were removed, the sequences re-aligned, and a final tree built using the same methods with midpoint rooting.

However, these increased alignment speeds affect the quality of the alignments [ 31].

Overall, the larger the neighborhood size, the better the alignment quality, even though all neighborhood sizes except T1 can in some cases result in higher-quality alignments than any other neighborhood size.

In general, the larger the neighborhood size within NCF, the higher the alignment quality.

The quality of the generated word alignment depends on the quality of the input resources.

Consequently, the technique is applicable without compromising the alignment quality in the low sequence identity zone.

In order to optimize alignment parameters or measure the quality of alignments, a cost function was used which does not rely on any reference or ideal alignments.

To assess the alignment quality, we compared sequence alignments with the structural alignments generated by Fr-TM-align (Pandit and Skolnick, 2008), which allows flexible alignments, and DaliLite (ver. 3.3) (Holm et al., 2008) as reference alignments.