The phrase "alignment the order" is not correct in written English.
It appears to be a fragment and lacks clarity, making it difficult to determine its intended meaning or context.
Example: "We need to ensure alignment the order of our tasks for better efficiency."
Alternatives: "align the sequence" or "order the alignment".
We then concatenated these three alignments into one alignment in the order in which these domains occur in BEL/Pao elements (protease, reverse transcriptase and integrase) [ 16].
The assessment capability claimed by Samadani et al. appears to be variability of binocular alignment on the order of 0.01° magnitude.
Because OrthoMCL assigns orthologous group numbers on a "first-come, first-served" basis, orthologous genes ended up in the concatenated alignment in the order in which they were read by OrthoMCL, thus following the order in which they are located on the genomic contigs and scaffolds.
From the alignment the orientation, order and distance between the contigs was estimated.
GenBank accession numbers of proteins used for alignments in the order ArgB, ArgC, ArgD, ArgF, ArgG and ArgH, were as follows.
To quantify the number and size of recombination tracts, we concatenated the multiple alignments following the order of the A. baumannii ATCC 17978 strain and fetched 688 recombination events significantly highlighted by three procedures (RDP3, CHI2, and GENECONV, see Materials and Methods).
It does not make any assumptions on the alignment of the orders and, instead, it dynamically handles the potential rescheduling of the orders already on the system based on the available resources, and their state, in a time efficient way.
The optimal pair-wise alignment is the ordered list of cells where this signal travels through.
It is apparent that the final multiple gene order alignment is sensitive to the order of alignment steps.
(Note that some of the structural alignment algorithms ignore the order of the atoms on the backbone, but we do not change the order of the atoms in this paper).
