Sentence examples for alignment the number from inspiring English sources

Using the alignment, the number of reads that aligned to each gene for each sample separately, were counted (in-house script), and used to produce the counts matrix.

The important factors affecting the magnitude and frequency components of the shaft voltage generated, because of magnetic dissymmetry depend on the machine size, the stator core construction, the rotor alignment, the number of poles, the generator design, and load conditions.

After alignment, the number of sequences examined per wound sample was equilibrized to 300 sequences by sampling randomly without replacement to facilitate subsequent taxa abundance analyses.

For each alignment a percent identity score was calculated to determine the best match in the following way: excluding end gaps, ambiguous states (Ns) in the 454 sequence, and gaps introduced in the reference sequence during alignment the number of mismatches was calculated.

In terms of multiple sequence alignment, the number of bits used in the 1UN notation is correlated to the maximum length of the input sequences.

It appears that after BAR+ alignment, the number of annotation terms inherited by the sequences in a validated manner surpasses the same features described in Table 1.

For each of these, the database provides detailed positions of the query-EST alignment (the numbers above the ESTs, which are depicted as blue bars, refer to the nucleotide positions within the EST), the total length of EST (in parenthesis), the Expect value of the alignment together with identities (percentage of similarity) between the query and EST.

Then we determined from the alignments the number and coordinates of all amino acid changes that had occurred between the species pairs of each group (bacteria, fly, and mammals).

Initially, we estimated using the EST-to-mRNA and (method-specific) mRNA-to-genomic alignments the number of introns expected in the EST-to-genomic alignments.

The objective function is specifically tuned to finding SV events by taking into account the length and quality of alignments, the number of alignments in the OCS and the genomic distance between those alignments.

Although 760 or less false positives were expected in the 2.4 Gb AT-exclusive alignments, which was as large as the human-chimpanzee genome alignments, the number of false positives in the human-chimpanzee genome alignments may have been much lower than 760 since the AT blocks constitute small fractions of the genome.