Sentence examples for alignment the corresponding from inspiring English sources

In order to evaluate the applicability of the syntenic global alignment, the corresponding algorithm was used in the development of a new tool to the gene prediction problem called Exon_Finder2.

Where there are insertions or deletions in the alignment, the corresponding positions in the conservation gestalt contain dots.

In most cases, Shimodaira and Hasegawa tests confirm that, regarding a given locus alignment, the corresponding gene tree has a significantly higher log-likelihood than that of other individual gene trees.

Thus, for a given alignment, the corresponding shortened alignment of length 10 is contained in the shortened alignment of length 25, which is contained in the shortened alignment of length 50, and so on.

The transcripts within each of the resulting SCN gene clusters (or orthogroup sets) are reverse-complemented as necessary to ensure identical sequence orientation prior to multiple sequence alignment; the corresponding DNA reference sequence of A. thaliana (or an alternative, user-specified reference) is used to reorient sequences.

Sbalanced scores for the common domain pairs, averaged over domain families, were 0.026 0.032 lower according to the different alignment methods in VAST alignments than the corresponding guide alignments and 0.032 0.047 lower in SABmark alignments than the corresponding guide alignments.

We prepared an amino acid alignment and the corresponding cDNA alignment for the complete set of 25 sequences for the lineage test and a small dataset (14) containing only the functional mammalian PL10 homologs for the site-specific test.

Then, this alignment was used to define the alignment of the corresponding nucleotide sequences to avoid frame-shifting indels as alignment artifacts [46].

When the user clicks on the 'Alignment' button, the corresponding sequence-to-structure alignment appears in the drop-down row.

The resulting filtered protein alignments were used to guide the alignment of the corresponding CDSs using an in-house BioPerl script.

Pairs of orthologous amino acid sequences were aligned using ProbCons 1.12 [ 75], and the resulting alignments were used to guide the alignment of the corresponding CDSs.