Sentence examples for alignment that maps from inspiring English sources

The resultant subarray indicates the best portion of the alignment that maps to the reference or the inserted sequence.

Probe sets with consensus alignments that mapped to a single genomic location within the assembled chromosomes were retained.

Secondly, we performed a similar analysis on genes with assigned EC numbers (655 alignments) that were mapped onto KEGG pathways.

Finally, we defined the retrocopy set by selecting all remaining alignments and, if necessary, grouping any alignments that were mapped onto the same genomic locus (Supplementary Fig. S1).

From the BLAST results, we retained only those alignments that were mapped from the first base of the sequence (Additional file 1: Figure S1, step 4).

Reads from the alignment (BAM) files that mapped from 5 kb upstream to 5 kb downstream of the ICAM2 loci were scanned by a custom Perl script that recorded evidence of splicing from the CIGAR field, and accumulated counts of reads supporting either splicing or read-through at each site.

RUM is an alignment program that maps reads in three phases.

The intuition underlying S 3 is to penalize the alignments that map sparse regions of the network to denser ones and vise-versa (Saraph and Milenković, 2013).

Given GIs and phosphosite positions, we identify corresponding positions on the domain model alignments that map to the experimentally identified phophorylation sites via specific hits.

These outputs are then shuffled and sorted by Hadoop to collect all alignments that map to a given region of the genome.

For accepted junctions, any unresolved read alignments that mapped equally well to other junctions are claimed by the accepted junction prediction and are not counted toward the score of alternative junctions they matched equally well when they are considered later.