Sentence examples for alignment tags from inspiring English sources

To annotate the genomic regions linked to the top significant SNPs in this study, each scaffold associated with a filtered RAD tag was annotated using BLASTn (minimum e-value = 1 × 10−20, minimum of 85 bp of continuous alignment (tags are 89 bp after quality-filter).

In cases where the error rate of the sequencing platform exceeds the number of mismatches allowed during alignment, false positive uniquely aligning tags will occur (Supplementary Figure S1).

Base alignment quality tags were added using SAMtools calmd.

A pairwise alignment between tags to call some set of potential SNPs is then established.

As inherent to its algorithmic design, Tangram requires mappings to ME reference sequences, as well as BAM alignment file tags that are currently only provided by our own MOSAIK mapper.

Statistical analysis of clean tag alignment was conducted, including analysis of total clean tags and distinct clean tags (Additional file 3: S3, Additional file 2: S2).

Statistical analysis of clean tag alignment was conducted, including the analysis of total clean tags and distinct clean tags (Additional files 2 and 3).

With a stringent criterion of 0 mismatches within the 16-nucleotide tag alignments, most of the tags aligned to the models but large numbers of tags did not.

Using a stringent criterion of 0 mismatches within the 16 nucleotide tag alignments, most of the tags aligned to the models but large numbers of tags did not.

The strategy for alignment of RAD tags with the reference genome was also used for the 1,646 SNP markers with the 19 chromosomes for subsequent comparison.

We systemically examined the nucleotide changes of mature miRNAs by alignment of unannotated tags with mature sequence of miRNAs allowing one nucleotide mismatch [ 45, 46].