Sentence examples for alignment strategies from inspiring English sources

Reads with multiple alignments are more likely to be aligned to different locations by different aligners, due to the difference in alignment strategies these aligners employ, as well as the standards of how to randomly choose one alignment to report.

Both take input motifs' PWMs aligned by multiple alignment strategies, and iteratively build tree nodes until reaching each leaf node containing a single PWM.

First, protein sequences of the orthologs shared by all sampled species, including protein-coding genes cox1, cox2, cox3, atp6, atp8, atp9, nad1, nad2 nad4, nad5, nad4L nandL, anad6ad6, were aligned using a combination of six different alignment strategies (Muscle, Mafft, and dialignTX, in forward and reverse).

Two conformer-based alignment strategies were employed to construct reliable CoMFA models.

Two different alignment strategies, based on a putative kinetoplast DNA minor groove target, were used.

Two alignment strategies were used to fit analyzed molecules to a suitable conformational template.

Two conformer-based alignment strategies were employed to construct reliable 3D-QSAR models.

We report results from a study designed to assess the comparability of the two alignment strategies.

PG in general handles better these difficult to align datasets by combining a local alignment strategy with a more flexible way of assigning motif sites.

A global alignment strategy is suitable for our goal of aligning orthologous TF-encoding gene loci which are assumed to occur in the same order and orientation.

Two separate methods were used to align the coding regions of these sequences, in order to address potential alignment strategy biases.