Sentence examples for alignment specified in from inspiring English sources

The LG model of protein evolution is not implemented in the MPI version of MrBayes 3.1.2 (Altekar et al. 2004), and we used the best model implemented, for all but one multiple sequence alignment (specified in figure legend) WAG+I+G.

Rather, we measure sequence identity based on the alignment specified within the full MSA.

The loop regions of the RNA are specified in the alignment and may be modeled by either of the two single nucleotide foundation models (HKY + Г or GTR + Г).

This alignment process is particularly suitable since a target pressure distribution is specified in the inverse design problem.

Biggs [ 14] proposed that students are more motivated if outcomes assessed map closely to those specified in the curriculum and taught during the course ('curricular alignment').

The alignment parameters for all genes in Muscle were the default settings, which have been specified in a previous study (Mao et al. 2012).

We also concatenated the two alignments and ran a phylogenetic analysis on this combined matrix using the same models specified in the individual gene analyses.

(Dimensions specified in mm).

as specified in the Results section.

Primers used are specified in Table S1.

PCR primers are specified in Table 1.