The phrase "alignment simultaneously" is correct and usable in written English.
It can be used in contexts where you want to express that multiple elements are being aligned at the same time.
Example: "The team worked on the project to ensure that all components were in alignment simultaneously for optimal performance."
Alternatives: "concurrent alignment" or "synchronized alignment".
A comforting thought - if you still want to believe in financial sanity - is that this was a case of a "perfect storm," a rare failure that required a large number of stars to be in alignment simultaneously.
Thus, targeting the mitotic checkpoint and chromosome alignment simultaneously may selectively kill tumor cells.
In contrast, PlantOrDB has a seamlessly integrated interface, Tree-Alignment Combined Viewer, for viewing both a phylogenetic tree and relevant multiple sequence alignment simultaneously.
Multiple threads can process different pairwise alignments simultaneously and independently, with little loss of CPU time.
Visualizing all of the alignments simultaneously forms patterns indicative of biological phenomena that could not easily be identified by examining the alignments individually.
We call these orthologous alignments and visualize them using our Gmaj alignment viewer (Song, Hsu, Riemer, et al. 2011), which shows both the orthology calls and the full set of pairwise alignments simultaneously for comparison.
Multiple sequence alignment (MSA) can be seen as a generalization of pair-wise sequence alignment, in which, instead of aligning two sequences, k sequences are aligned simultaneously.
Despite not having many of his best players, Klinsmann deployed a defense-first 4-4-2 alignment that simultaneously frustrated the Mexican team and kept the Americans in the contest.
Accordingly, we designed highly specific NASBA antisense and degenerate sense primers for a segment of 16S rRNA variable region by universal sequence alignment to simultaneously detect S. Enteritidis and S. Typhimurium.
In both cases, libraries of known exon exon junctions can be optionally used during alignment, either simultaneously with chromosome mapping, or after chromosome mapping.
Another natural extension of the current model is to include recombination models that allow topology and branch length variation along the alignment while simultaneously estimating heterotachy.
