Sentence examples for alignment settings from inspiring English sources

This was particularly the case when the noise level was set to extreme values or the tolerance size for the retention times in the alignment settings was set extensively large (e.g. 10% in set 13).

Table 2 shows the output of the various tools aligned using Bowtie 2 in both tolerant and strict alignment settings.

After excluding some gaps, 13,749 nucleotides were aligned (Align_Set_1) for 19 Chondrichthyes species (including C. monstrosa), and 13,784 nucleotides were aligned (Align_Set_2) for 18 Selachii and Batoidea species using the ClustalW sequence alignment settings with few manual adjustments (Table 2).

Experimental results are presented for the measured erosion rates of the unidirectional (UD) composite material at two perpendicular fiber alignment settings relative to the impacting particle stream.

All alignment settings were employed at default values.

Four datasets were derived from each genome pair comparison with different alignment settings.

Our results demonstrate that different sets of polymorphisms are identified by association analyses, depending on alignments settings (Table 3).

A similar number of reads from CAST yield nearly twice as many valid alignments, and relaxing the aligner settings does not correct this problem (data not shown).

The classification performance of the supervised algorithms measured by G-Mean and AUC metrics did not significantly change in the four test sets obtained with different alignment parameter settings.

In brief, the predicted amino acid sequences of BnaCBLs or BnaCIPKs were aligned using ClustalX1.83 program with the same multiple alignment parameter settings as before.

The four datasets (Blosum50, Blosum621, Blosum622, and Pam250) of each genome pair, summarized in Tables 3, 4, and 5, were built from combinations of alignment parameter settings shown in Table 6.