Sentence examples for alignment sets of from inspiring English sources

It is designed to scale to alignment sets of 10 or more base pairs, which is typical for the deep resequencing of one human individual.

In order to evaluate the power of our identification method, simulations were performed using sequence alignment sets of random sequences, each consisting of 100,000 pairs of around 5,000 bp sequences and including an inversion in each pair.

For example, the existing alignment sets of 28 mammalian species (Miller et al., 2007) and 46 vertebrate species (Fujita et al., 2011) occupy several hundred gigabytes of disk space and contain millions of alignment blocks.

Site PP1: a short-term safety measures (sets of countermeasures "A", "B" and "C"), b re-design of the horizontal alignment (set of countermeasure "D").

Using a previously published method [ 20, 30, 31] which employs single-linkage clustering on top of BLASTp alignments, sets of pan- and core-genomes were estimated, based on all 73 Salmonella genomes.

For the alignment sets, we generated control sets of shuffled alignments.

All alignment sets were examined for homogeneity of base frequencies and substitution saturation.

Here, we present a method for hierarchical alignment of sets of 2D NMR spectra, thereby enabling pattern recognition using full-resolution data; we call this overall approach HATS-PR for hierarchical alignment of two-dimensional spectra-pattern recognition.

The alignment was then manually adjusted to ensure consistency with pfam00379, particularly at the edges of the alignment, and to ensure that alignments among sets of highly similar genes were not distorted by the global optimum.

Therefore, we do not formally distinguish between alignments and sets of fragments.

All the studies mentioned earlier require the construction of multiple sequence alignments from sets of homologous genes.