The phrase "alignment sequences" is correct and usable in written English.
It can be used in contexts related to biology, computer science, or data analysis, particularly when discussing the arrangement of sequences for comparison or analysis.
Example: "The researchers analyzed the alignment sequences of the DNA samples to identify genetic variations."
Alternatives: "sequence alignments" or "aligned sequences".
As the entire data from the ten subjects contained too many sequences for a quality alignment, sequences were aligned by subject using the Aligner web tool of the RDP, and then clustered using the Complete Linkage Clustering tool (with a maximum distance cutoff of 97%).
BWA alignments were performed using the bwa aln command with options –n 1, −o 0, and –e 0 and bwa samse with option –n 4. When doing a second alignment, the customized reference was updated, if necessary, to contain one of the alleles at predicted heterozygous sites from the first alignment, sequences were aligned, and the alignments were filtered as before.
The post-processed information is then given to a new dynamic programming routine that produces an optimally segmented consensus secondary structure for each of the multiple alignment sequences.
We present a conditional log-linear model for string-to-string transduction, which employs overlapping features over latent alignment sequences, and which learns latent classes and latent string pair regions from incomplete training data.
'Average number of disulfide bonds' in each family is the average number of disulfide bonds in alignment sequences with P-score greater than 3 in all the pairwise alignments.
For this alignment, sequences corresponding to the chemokine domain (Pfam PF00048 [ 63]) were extracted.
The resulting protein alignment was reviewed and finalized using the multiple alignment sequence editor MASE.
BTT performed the sequence alignment, sequence analysis, and tree-drawing.
Clustal Omega was used for multiple sequence alignment of sequences.
Katoh, K., Rozewicki, J. & Yamada, K. D. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization.
We removed the redundancy of the alignment discarding sequences with more than 63% of sequence identity.
