Sentence examples for alignment score of from inspiring English sources

The alignment score of SP5 for aligning query position i with the template position j is <img src="http://journals.plos.org/plosone/article/asset?id=info?doi/10.1371/journal.pone.0002325.e001.PNG" class= inline-graphic"/> with four weight parameters (wstruc, w2ndary, wsa, and wΔ) and a constant shift sshift.

The main filter uses a precomputed table containing the alignment score of short four base words aligned against each other.

Raw reads were initially aligned to the full genome using an alignment score of 260 or greater, which for this dataset allowed for only one SNV per read.

An alignment score of b2 occurs only if we align a sequence of these symbols to itself.

For example, the political alignment score of the average story in The New York Times came in at –0.62 (somewhat liberal) whereas the average Fox News story was +0.78 (somewhat conservative).

The prediction is based on the change in the similarity of the sequence to related protein sequences in a MSA by a delta alignment score of the reference and the variant carrying protein sequence with respect to the alignment of homologous sequences (Choi 2012).

Then, where nc(M1) is the non-coding region of M1 and R' is one m-kb long region in nc(M1), and S R, R') is the sum of local alignment scores of all pairs of aligned segments in R and R' output from CHAOS [ 16].

Alignment scores of extracted conserved regions perform clearly better on the training and test set.

For C5, besides diversity in the feature set, alignment scores of conserved regions turned out to be very useful.

Even though the optimal alignment scores of the SW algorithm can be used to detect related sequences, the scores are biased by sequence length and composition.

Pairwise alignment scores of Vsp dome region sequences were obtained using ClustalW (Version 7.6.0.87).