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Further, the alignment reveals a second highly conserved glycine near the extracellular end of the inner helix, which may be important in minimizing deformation of the extracellular vestibule as the channel opens.

Structure-based sequence alignment reveals a number of highly conserved amino acids (Fig. 2B).

Third, a multiple sequence alignment reveals a conserved motif (LMNNAEHIN in falcipain-2) in the plasmodial proteases falcipain-2, falcipain-3, and berghepain-2 that represents an insertion relative to the sequences of procathepsin K and procathepsin L (Fig. 1).

The gp38 sequence alignment reveals a strict conservation of both the sequence and synteny of the GRMs.

This alignment reveals a highly conserved section, across all species, corresponding to the experimentally determined human promoter region, and the chicken and rat TSS.

Analysis of a clustalw sequence alignment reveals a highly conserved histidine residue in a motif [R,K] [L,M]H [A,S,T,Q,M]L [E,Q,N] that is similar to the adenosine deaminase "motif I" found in all adenosine deaminases [ 113].

Statistical coupling analysis (SCA) of a large multiple sequence alignment revealed a network of nine co-evolved residues that affected all but one double mutant.

Multiple sequence alignment revealed a low conservation among the three subtypes with sequence identity of ∼10% between them, suggesting that the peptide repertoires presented by HLA-DR, -DP and -DQ are not overlapped to each other, and they may be involved in different immune functions and dysfunctions.

The results obtained from the amino acid sequence alignment revealed a variable distribution of identities ranging from 100% (B. licheniformis 9945A) to 62% (B. mojavensis) within ComP.

Qualitatively speaking, cell alignment revealed a relatively weak influence of the positioning density of the CNF grid patterns on cell shape and ordering.

This alignment revealed a marked difference between the HLA-G molecule and other MHC class I molecules.