The phrase "alignment protocol" is correct and usable in written English.
It can be used in contexts related to technology, communication, or organizational processes where alignment or agreement is necessary.
Example: "Before we proceed with the project, we need to establish an alignment protocol to ensure all team members are on the same page."
Alternatives: "coordination procedure" or "agreement framework".
This illustrates that even with exomes from both parents available, an alignment protocol that first aligns reads to the reference genome yields a far larger set of candidate mutations than D iamund's direct alignment algorithm.
We demonstrated that this tip/substrate alignment protocol allows us to obtain highly resolved constant-height SECM images over large areas with ease.
With the same alignment protocol, a statistically reliable CoMSIA model # 14 was also derived (q2 = 0.962, r2 = 0.961).
In addition, the characteristics of the material, thickness, alignment protocol application and staging may affect the efficiency of the orthodontic movement.
The ease of the alignment protocol will stimulate interest for testing new applications which require a good control of the pore density and morphology (periodicity, and high monodispersity of the pore size distribution).
The E-INS-I alignment protocol was used to improve alignment accuracy between distantly related homologs [67].
In the context of bi-directional communications,[6, 10] design the signal alignment protocols in amplify-and-forward (AF MIMOO relay systems, where the inter-stream interference is eliminated by applying precoding, and the intra-stream interference is coped with by using network coding.
Finally, the PCAIN methodology provides for utilizing the fold-conserved residues as "anchors" in the target-template sequence alignment step, thus increasing efficacy of conventional alignment protocols.
We have also set-up platform-specific alignment protocols.
A comprehensive explanation of DNA extraction, PCR, and alignment protocols is given in [ 81].
Various control runs were done using IUB (at [ 58]), Dialign in the Panta rhei package [ 59]; University of Bielefeld, Germany) and MAVID [ 60] alignment protocols.
