Sentence examples for alignment programmes from inspiring English sources

And Paul Morris, who spent 18 years at Virgin Media before joining agency Brand Vista – which specialises in the delivery of what it calls "brand alignment" programmes – notes that metrics can be defined on a case-by-case basis.

It started with the self-alignment of the produced sequences via BLAT analysis using the following parameter settings: -tileSize = 8, -minMatch = 1, -minScore = 10, -repMatch = –1 and -oneOff = 2. BLAT is one of the local pairwise alignment programmes.

These orthologous proteins were aligned using the multiple sequence alignment programme Muscle (Edgar, 2004) and the position of the SLiM-binding domain identified within the alignment.

The i-OPAL alignment programme was used to align the nonlinearly fluctuating LC retention time axis of all LC-MS data to finally generate a single combined LC-MS data set for the soluble and the insoluble fractions, respectively.

Alignments of these nucleotide sequences were carried out using the clustalW2 multiple sequence alignment programme (http://www.ebi.ac.uk/Tools/clustalw2/index.html).html

All structural comparisons were performed with psc++, an improved version of the ProSup structural alignment programme [ 53].

The generated sequence tags were mapped onto the human genomic sequence (hg18 as of UCSC Genome Browser) using the sequence alignment Programme Eland (Illumina).

The PCR fragments obtained were then cloned, and six independent sequences were scrutinised for SNPs and SSRs using Vector NTI sequence alignment programme (Invitrogen, Carlsbad, CA, USA).

In fact, its phylogenetic analysis highlighted that the nematode possesses two distinct lysozyme types (Fig. 2; inferred from the alignment obtained using default settings of the alignment programme), thus confirming previous observations.

Sequence identities and similarities of Bet v 1-like superfamily members to Bet v 1 were determined using the global sequence alignment programme Needle from the EMBOSS package provided by the Center of Integrative Bioinformatics, University of Vienna, Austria.

Sequence identities and similarities of Bet v 1 family members to Bet v 1 [Uniprot:P15494] were determined using the global sequence alignment programme Needle from the EMBOSS package provided by the Center of Integrative Bioinformatics, University of Vienna, Austria.