Sentence examples for alignment parameter from inspiring English sources

Color channels were carefully aligned using alignment parameter from control measurements with 0.5 µm diameter multi-spectral fluorescent beads (Life technologies).

In brief, the predicted amino acid sequences of BnaCBLs or BnaCIPKs were aligned using ClustalX1.83 program with the same multiple alignment parameter settings as before.

All mature tRNA sequences (input as tDNA sequences) were aligned using CLUSTALW [38] with the following parameters: Multiple Alignment parameter "Gap Opening" = 22.5; Multiple Alignment parameter "Gap Extension Penalty" = 0.83; Pairwise Alignment parameter "Gap Opening" = 22.5; Multiple Alignment parameter "Delay Divergent Sequence" = 25%.

12S, 16S, and tRNA sequences were initially aligned with Clustal X [ 17] assuming the default pairwise and multiple alignment parameter values.

The alignment parameter represents the development of a linear fabric and thus increases with bottom current strength.

Experimental results show that the quality of deblurred images achieved by the proposed Taguchi method is better than those obtained by deblurring methods which are not involved with the alignment parameter calibration and filter selection.

In conclusion, our data suggest that aligners, alignment parameters and pre-alignment data filtering tools all have a great impact on final NGS haplotypes.

Contigs were aligned with alignment parameters set to > 97% identity and > 40 nucleotides overlap using Sequencher (Gene Codes Corp., Ann Arbor, MI, USA).

Depending upon the alignment parameters used, this lysine can align structurally with that found in other kinases, although for the parameters we have chosen it does not.

The sequences were aligned using Clustal Omega with default alignment parameters.

Sequences were aligned using ClustalX v2.0 [ 24] (pairwise alignment parameters: gap opening = 10.0, gap extend = 0.1; multiple alignment parameters: gap opening = 10.0, gap extend = 0.2).